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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. OGFOD1, 2-oxoglutarate and iron-dependent oxygenase domain containing 1
Sequence ID:NM_018233
Entrez Gene ID:55239
Ensembl ID:ENSG00000087263

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q12.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 56485435 - 56511041

 Exon Info From UCSC:
NM_018233

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5427174Full LengthBC0329192-oxoglutarate and iron-dependent oxygenase domain containing 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_018233 NP_060703 Q8N543  

Related Sequences

 
mRNAGenPeptSwissProt
BC032919 AAH32919 Q8N543
AK001688 BAA91838 Q8N543
AB046832 BAB13438 Q8N543
AK022130 BAB13967 Q8N543
AK022752 BAB14226 Q8N543
AK024314 BAB14880 Q8N543
AK304584 BAG65372 B4E360

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens OGFOD1 NP_060703 M.musculus Ogfod1 270086 Gene Info NP_808435 83
R.norvegicus Ogfod1 307657   NP_001100881 83
A.gambiae AgaP_AGAP002934 4577264   XP_001237409 37
C.elegans C17G10.1 173947   NP_495088 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)