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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PGAP1, post-GPI attachment to proteins 1
Sequence ID:NM_024989
Entrez Gene ID:80055
Ensembl ID:ENSG00000197121

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q33.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 197705957 - 197791340

 Exon Info From UCSC:
NM_024989

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015996BC152719post-GPI attachment to proteins 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079265  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024989 NP_079265 Q75T13 PGAP1

Related Sequences

 
mRNAGenPeptSwissProt
BC152719 AAI52720 Q75T13
AY358624 AAQ88987 Q75T13
AK022439 BAB14035 Q75T13
AB128038 BAD13427 Q75T13
AK302663 BAG63898 B4DYY6
BX648642 CAH10543 Q75T13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PGAP1 NP_079265 R.norvegicus Pgap1 316400   NP_973719 90
M.musculus Pgap1 241062 Gene Info NP_001156786 90
D.melanogaster CG3160 31487   NP_572245 29
A.gambiae AgaP_AGAP011299 1270633   XP_309348 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)