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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. RTN4RL1, Reticulon 4 receptor-like 1
Sequence ID:NM_178568
Entrez Gene ID:146760
Ensembl ID:ENSG00000185924

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 1839789 - 1841102

NM_178568 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
22315118379721841101
3152318319281461928177

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40121824Full LengthBC128608reticulon 4 receptor-like 1
4941649IncompleteBC023311reticulon 4 receptor-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_848663  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_178568 NP_848663 Q86UN2 LRR_1
LRRNT

Related Sequences

 
mRNAGenPeptSwissProt
BC128608 AAI28609 Q86UN2
AF532859 AAP21836 Q86UN2
AY250219 AAP82836 Q86UN2
AL834409 CAD39071 Q86UN2
BK001305 DAA01388 Q86UN2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens RTN4RL1 NP_848663 M.musculus Rtn4rl1 237847 Gene Info NP_808376 89
R.norvegicus Rtn4rl1 303311   NP_852042 88

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)