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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GABRE, gamma-aminobutyric acid (GABA) A receptor, epsilon
Sequence ID:NM_004961
NM_021984
NM_021987
NM_021990
RefSeqGene ID:NG_012511
Entrez Gene ID:2564
Ensembl ID:ENSG00000102287

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xq28Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 151137870 - 151139024

Transcript StartTranscript EndChromosomal Start Chromosomal End
171976151121596151123555
19772176151123839151124038
21772329151124179151124331
23302467151128310151128447
24682550151129754151129836
25512771151130894151131114
27722839151138140151138207
28403057151138656151138873
30583167151143041151143150

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4798754Full LengthBC026337gamma-aminobutyric acid (GABA) A receptor, epsilon
4799619Full LengthBC059376gamma-aminobutyric acid (GABA) A receptor, epsilon
5312742Full LengthBC047108gamma-aminobutyric acid (GABA) A receptor, epsilon

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004952  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_004961 NP_004952 P78334 Neur_chan_LBD
Neur_chan_memb

Related Sequences

 
mRNAGenPeptSwissProt
U66661 AAB49284 P78334
BC026337 AAH26337 Q6PCD2
BC047108 AAH47108 Q6PCD2
BC059376 AAH59376 Q6PCD2
HQ448560 ADQ33039  
AK299174 BAG61220 A8MT31
AK303072 BAG64188 B4DZS6
Y07637 CAA68914 P78334
Y09765 CAA70904 P78334

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GABRE NP_004952 R.norvegicus Gabre 65191   NP_075579 73
M.musculus Gabre 14404 Gene Info NP_059065 72

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)