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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CTPS2, CTP synthase 2
Sequence ID:NM_001144002
NM_175859
NM_019857
RefSeqGene ID:NG_013229
Entrez Gene ID:56474
Ensembl ID:ENSG00000047230

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 16607671 - 16731005

 Exon Info From UCSC:
NM_001144002
NM_175859
NM_019857

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5268973Full LengthBC034986CTP synthase II
3945887IncompleteBC006256CTP synthase II

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_787055  NP_062831  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001144002 NP_001137474      
NM_019857 NP_062831 Q9NRF8 EC 6.3.4.2 GATase
CTP_synth_N
NM_175859 NP_787055 Q9NRF8 EC 6.3.4.2 GATase
CTP_synth_N

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF226667 AAF91241 Q9NRF8 EC 6.3.4.2
BC006256 AAH06256 Q9NRF8 EC 6.3.4.2
BC034986 AAH34986 Q9NRF8 EC 6.3.4.2
JF432696 ADZ15913    
AK023549 BAB14607 Q9NRF8 EC 6.3.4.2
AK024070 BAB14814 Q9NRF8 EC 6.3.4.2
AK025654 BAB15204 Q9H6Q0  
AK125332 BAG54184 Q9NRF8 EC 6.3.4.2
AK125348 BAG54188 Q9NRF8 EC 6.3.4.2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CTPS2 NP_001137474 R.norvegicus Ctps2 619580   NP_001030170 91
M.musculus Ctps2 55936 Gene Info NP_001162041 90
A.thaliana AT1G30820 839964   NP_174368 59
A.thaliana AT4G20320 827780   NP_001078411 58
S.pombe cts1 2542937   NP_593254 58
S.cerevisiae URA7 852241   NP_009514 57
N.crassa NCU00261 3873894   XP_957732 55
A.thaliana AT2G34890 818054   NP_181035 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)