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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. ETV1, Ets variant 1
Sequence ID:NM_004956
NM_001163147
NM_001163148
NM_001163150
NM_001163151
NM_001163149
NM_001163152
RefSeqGene ID:NG_029795
Entrez Gene ID:2115
Ensembl ID:ENSG00000006468

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 13932654 - 14029289

 Exon Info From UCSC:
NM_004956
NM_001163147
NM_001163148
NM_001163150
NM_001163151
NM_001163149
NM_001163152

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30345383Full LengthBC098403ets variant 1
40025690Full LengthBC106762ets variant 1
40025693Full LengthBC106763ets variant 1
5273913IncompleteBC042950ets variant gene 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004947  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001163147 NP_001156619    
NM_001163148 NP_001156620    
NM_001163149 NP_001156621    
NM_001163150 NP_001156622    
NM_001163151 NP_001156623    
NM_001163152 NP_001156624    
NM_004956 NP_004947 P50549 Ets
ETS_PEA3_N

Related Sequences

 
mRNAGenPeptSwissProt
U17163 AAA79844 P50549
BC098403 AAH98403 P50549
BC106762 AAI06763 P50549
BC106763 AAI06764 P50549
EU446473 ABZ92002  
AB209202 BAD92439 P50549
AK312863 BAG35715 P50549
AK293802 BAH11600 B7Z1R4
AK294572 BAH11815 B7Z2C9
AK294755 BAH11870 P50549
AK299693 BAH13104 B7Z618
AK316007 BAH14378 P50549
X87175 CAA60642 P50549
CR627389 CAH10484 Q6AI30

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ETV1 NP_004947 M.musculus Etv1 14009 Gene Info NP_031986 98
R.norvegicus Etv1 362733   NP_001156628 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)