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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. H1F0, H1 histone family, member 0
Sequence ID:NM_005318
Entrez Gene ID:3005
Ensembl ID:ENSG00000189060

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 38201235 - 38203442

NM_005318 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
123293820111338203441

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3049108Full LengthBC000145H1 histone family, member 0
5189077Full LengthBC029046H1 histone family, member 0

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005309  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005318 NP_005309 P07305 Linker_histone

Related Sequences

 
mRNAGenPeptSwissProt
BC000145 AAH00145 P07305
BC029046 AAH29046 P07305
DQ890977 ABM81903  
DQ894151 ABM85077  
AK312583 BAG35477 P07305
CR456502 CAG30388 P07305
CR542220 CAG47016 P07305
CU013100 CAK54531  
CU013388 CAK54830  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens H1F0 NP_005309 M.musculus H1f0 14958 Gene Info NP_032223 95
R.norvegicus H1f0 24437   NP_036710 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)