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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CCR9, chemokine (C-C motif) receptor 9
Sequence ID:NM_001256369
NM_006641
NM_031200
RefSeqGene ID:NG_029472
Entrez Gene ID:10803
Ensembl ID:ENSG00000173585

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p21.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 45928052 - 45942367

 Exon Info From UCSC:
NM_006641
NM_031200

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
7262627Full LengthBC069678chemokine (C-C motif) receptor 9
6971963IncompleteBC095516chemokine (C-C motif) receptor 9

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_006632  NP_112477  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001256369 NP_001243298    
NM_006641 NP_006632 P51686 7tm_1
NM_031200 NP_112477 P51686 7tm_1

Related Sequences

 
mRNAGenPeptSwissProt
AF145207 AAD38539 Q9UN87
AF145439 AAF66699 P51686
AF145440 AAF66700 P51686
BC069678 AAH69678 P51686
BC095516 AAH95516 P51686
AK312824 BAG35681 B2R734
AK313366 BAG36166 B2R8G9
AJ132337 CAB43477 P51686

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CCR9 NP_112477 M.musculus Ccr9 12769 Gene Info NP_001160097 86
R.norvegicus Ccr9 282832   NP_758832 86

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)