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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SYN1, synapsin I
Sequence ID:NM_006950
NM_133499
RefSeqGene ID:NG_008437
Entrez Gene ID:6853
Ensembl ID:ENSG00000008056

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
EPILEPSY, X-LINKED, WITH VARIABLE LEARNING DISABILITIES ANDBEHAVIOR DISORDERS 

Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp11.23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 47431303 - 47435632

 Exon Info From UCSC:
NM_006950
NM_133499

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4636091IncompleteBC036711synapsin I

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_598006  NP_008881  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_006950 NP_008881 P17600 Synapsin_N
Synapsin_C
NM_133499 NP_598006   Synapsin_N
Synapsin_C

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SYN1 NP_008881 R.norvegicus Syn1 24949   NP_062006 96
M.musculus Syn1 20964 Gene Info NP_038708 96

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)