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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. MMP10, matrix metallopeptidase 10 (stromelysin 2)
Sequence ID:NM_002425
Entrez Gene ID:4319
Ensembl ID:ENSG00000166670

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:11q22.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:11: 102641244 - 102651359

NM_002425 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
20410102641233102641623
411514102642742102642845
515674102643577102643736
675808102645918102646051
809953102647010102647154
9541118102647342102647506
11191244102649354102649479
12451393102649943102650091
13941635102650234102650475
16361777102651217102651358

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3140935Full LengthBC002591matrix metallopeptidase 10 (stromelysin 2)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002416  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_002425 NP_002416 P09238 EC 3.4.24.22 Hemopexin
Peptidase_M10
PG_binding_1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC002591 AAH02591 P09238 EC 3.4.24.22
BT007442 AAP36110 P09238 EC 3.4.24.22
DQ891931 ABM82857    
DQ895118 ABM86044    
AK222601 BAD96321 P09238 EC 3.4.24.22
AK313960 BAG36676 P09238 EC 3.4.24.22
X07820 CAA30679 P09238 EC 3.4.24.22

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MMP10 NP_002416 M.musculus Mmp10 17384 Gene Info NP_062344 76
R.norvegicus Mmp10 117061   NP_598198 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)