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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BCL6B, B-cell CLL/lymphoma 6, member B
Sequence ID:NM_181844
Entrez Gene ID:255877
Ensembl ID:ENSG00000161940

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 6926388 - 6931371

NM_181844 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
15069263686926417
5124169269786927168
24246369274016927622
46476369277196928018
76782969280196928081
83095469283946928518
955111969297756929939
1120125069300236930153
1251138869302686930405
1389352869308216932960

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
30342006Full LengthBC059404B-cell CLL/lymphoma 6, member B (zinc finger protein)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_862827  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_181844 NP_862827 Q8N143 zf-C2H2
BTB

Related Sequences

 
mRNAGenPeptSwissProt
BC059404 AAH59404 Q8N143
EU446594 ABZ92123  
AB076580 BAC00962 Q8N143
AK292878 BAF85567 A8KA13
AK293102 BAF85791 A8KA13
AK122893 BAG53785 A8KA13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BCL6B NP_862827 M.musculus Bcl6b 12029 Gene Info NP_031554 91
R.norvegicus Bcl6b 360551   NP_001101749 91

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)