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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. VTN, vitronectin
Sequence ID:NM_000638
Entrez Gene ID:7448
Ensembl ID:ENSG00000255604

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:17q11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:17: 26694305 - 26697328

NM_000638 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
42052669430026694501
2065502669473526695079
5517032669554126695693
7048602669589226696048
86110002669630926696448
100113452669652726696871
134614652669694726697066
146616782669716026697372

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4040317Full LengthBC005046vitronectin

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_000629  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_000638 NP_000629 P04004 Hemopexin
Somatomedin_B

Related Sequences

 
mRNAGenPeptSwissProt
BC005046 AAH05046 P04004
DQ893394 ABM84320  
DQ896716 ABM87715  
AK312968 BAG35807 P04004
AK298441 BAH12789 B7Z553
X03168 CAA26933 P04004

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens VTN NP_000629 M.musculus Vtn 22370 Gene Info NP_035837 76
R.norvegicus Vtn 29169   NP_062029 76

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)