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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PHACTR4, phosphatase and actin regulator 4
Sequence ID:NM_023923
NM_001048183
Entrez Gene ID:65979
Ensembl ID:ENSG00000204138

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p35.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 28800333 - 28824043

 Exon Info From UCSC:
NM_023923
NM_001048183

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4422413Full LengthBC029266phosphatase and actin regulator 4
4577873Full LengthBC021247phosphatase and actin regulator 4
4825777Full LengthBC068508phosphatase and actin regulator 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_076412  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001048183 NP_001041648 Q8IZ21  
NM_023923 NP_076412   RPEL

Related Sequences

 
mRNAGenPeptSwissProt
AF130081 AAG35507 Q8IZ21
BC021247 AAH21247 Q8IZ21
BC029266 AAH29266 Q8IZ21
BC068508 AAH68508 Q8IZ21
JF432272 ADZ15489  
AK023233 BAB14483 Q8IZ21
AK025436 BAB15130 Q8IZ21
CR749449 CAH18286 Q8IZ21

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PHACTR4 NP_076412 M.musculus Phactr4 100169 Gene Info NP_780515 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)