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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CDC42EP1, CDC42 effector protein (Rho GTPase binding) 1
Sequence ID:NM_152243
Entrez Gene ID:11135
Ensembl ID:ENSG00000128283

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:22q13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:22: 37956504 - 37965075

NM_152243 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
11253795647037956594
1268663796207837962818
86721603796411437965407

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4300677Full LengthBC009356CDC42 effector protein (Rho GTPase binding) 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689449  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_152243 NP_689449 Q00587 PBD

Related Sequences

 
mRNAGenPeptSwissProt
M88338 AAA36606 Q00587
BC009356 AAH09356 Q00587
DQ893459 ABM84385  
DQ896282 ABM87281  
AK292190 BAF84879 Q00587
CR456524 CAG30410 Q00587
CU013124 CAK54555  
CU013412 CAK54854  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CDC42EP1 NP_689449 R.norvegicus Cdc42ep1 315121   NP_001073168 78
M.musculus Cdc42ep1 104445 Gene Info NP_081495 77

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)