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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. EDEM1, ER degradation enhancer, mannosidase alpha-like 1
Sequence ID:NM_014674
Entrez Gene ID:9695
Ensembl ID:ENSG00000134109

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:3p26.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 5229490 - 5257805

 Exon Info From UCSC:
NM_014674

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4863779Full LengthBC019088ER degradation enhancer, mannosidase alpha-like 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_055489  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_014674 NP_055489 Q92611 Glyco_hydro_47

Related Sequences

 
mRNAGenPeptSwissProt
BC019088 AAH19088 Q92611
DQ892678 ABM83604  
DQ895921 ABM86847  
D86967 BAA13203 Q92611
AK292643 BAF85332 Q92611
AK298511 BAG60717 B4DPV5
AK302065 BAG63455 B4DXP3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens EDEM1 NP_055489 M.musculus Edem1 192193 Gene Info NP_619618 94
R.norvegicus Edem1 297504   XP_238366 93
C.elegans alpha-mannosidase 177857   NP_501802 60
S.pombe mnl1 2541981   NP_594434 47
A.thaliana AT1G27520 839643   NP_564288 46

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta