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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CPN1, carboxypeptidase N, polypeptide 1
Sequence ID:NM_001308
RefSeqGene ID:NG_012060
Entrez Gene ID:1369
Ensembl ID:ENSG00000120054

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
CARBOXYPEPTIDASE N DEFICIENCY 

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 101802183 - 101841658

NM_001308 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1266101802064101802329
267385101808514101808632
386485101814103101814202
486625101816769101816908
626737101823370101823481
738920101824944101825126
9211076101829470101829625
10771273101835667101835863
12741756101841159101841641

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5227795Full LengthBC027897carboxypeptidase N, polypeptide 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001299  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001308 NP_001299 P15169 EC 3.4.17.3 Peptidase_M14

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC027897 AAH27897 P15169 EC 3.4.17.3
DQ892051 ABM82977    
DQ895244 ABM86170    
DQ895245 ABM86171    
AK313972 BAG36687 B1AP59  
X14329 CAA32507 P15169 EC 3.4.17.3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CPN1 NP_001299 M.musculus Cpn1 93721 Gene Info NP_109628 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)