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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. C9orf114, chromosome 9 open reading frame 114
Sequence ID:NM_016390
Entrez Gene ID:51490
Ensembl ID:ENSG00000198917

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q34.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 131584950 - 131592073

 Exon Info From UCSC:
NM_016390

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4213299Full LengthBC010579chromosome 9 open reading frame 114
4539701Full LengthBC063644chromosome 9 open reading frame 114
4843384Full LengthBC021273chromosome 9 open reading frame 114
5176852Full LengthBC033677chromosome 9 open reading frame 114
5725479Full LengthBC046133chromosome 9 open reading frame 114
5757547Full LengthBC039590chromosome 9 open reading frame 114

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_057474  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_016390 NP_057474 Q5T280 DUF171

Related Sequences

 
mRNAGenPeptSwissProt
AF161459 AAF29074 Q9P041
BC010579 AAH10579 Q5T280
BC021273 AAH21273 Q5T280
BC033677 AAH33677 Q5T280
BC039590 AAH39590 Q5T280
BC046133 AAH46133 Q5T280
BC063644 AAH63644 Q5T280
HQ448052 ADQ32533  
AK303563 BAG64586 B4E0X4

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens C9orf114 NP_057474 M.musculus D2Wsu81e 227695 Gene Info NP_766248 90
A.gambiae AgaP_AGAP007570 5667053   XP_001687890 54
D.melanogaster CG12128 36042   NP_610543 51
A.thaliana AT5G19300 832050   NP_197431 45
C.elegans B0361.6 176028   NP_498602 44
N.crassa NCU00597 3881879   XP_965737 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)