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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DENR, density-regulated protein
Sequence ID:NM_003677
Entrez Gene ID:8562
Ensembl ID:ENSG00000139726

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, skin, soft tissue, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:12q24.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:12: 123237396 - 123255607

NM_003677 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1127123237370123237496
128242123238239123238353
243262123246733123246752
263347123247391123247475
348431123249850123249933
432548123252034123252150
549688123253328123253467
6893060123253580123255951

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4300744Full LengthBC007860density-regulated protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003668  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003677 NP_003668 O43583 SUI1

Related Sequences

 
mRNAGenPeptSwissProt
AF038554 AAC02985 O43583
AF103800 AAF02420 O43583
BC007860 AAH07860 O43583
HQ447117 ADQ31604  
AB014731 BAB20268 O43583
AK299463 BAG61429  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DENR NP_003668 R.norvegicus LOC687565 687565   NP_001108518 97
M.musculus Denr 68184 Gene Info NP_080879 96
A.gambiae AgaP_AGAP006125 1276795   XP_316185 55
C.elegans Y47D3A.21 176556   NP_499450 54
D.melanogaster CG9099 32679   NP_573176 53
A.thaliana AT5G11900 831063   NP_196751 44
N.crassa NCU02984 3881495   XP_965370 43
S.pombe SPBC16C6.05 2540154   NP_596803 41
S.cerevisiae TMA22 853471   NP_012548 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)