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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. DDX4, DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
Sequence ID:NM_019039
NM_001142549
NM_001166533
NM_001166534
NM_024415
Entrez Gene ID:54514
Ensembl ID:ENSG00000152670

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5p15.2-p13.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 55062738 - 55112605

 Exon Info From UCSC:
NM_001142549
NM_001166533
NM_001166534
NM_024415

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5298807Full LengthBC047455DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
30386875Full LengthBC088362DEAD (Asp-Glu-Ala-Asp) box polypeptide 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_077726  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001142549 NP_001136021      
NM_001166533 NP_001160005      
NM_001166534 NP_001160006      
NM_024415 NP_077726 Q9NQI0 EC 3.6.4.13 DEAD
Helicase_C

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF262962 AAF72705 Q9NQI0 EC 3.6.4.13
AY004154 AAF86585 Q9NQI0 EC 3.6.4.13
BC047455 AAH47455 Q9NQI0 EC 3.6.4.13
BC088362 AAH88362 Q9NQI0 EC 3.6.4.13
AK292417 BAF85106 Q9NQI0 EC 3.6.4.13
AK093439 BAG52716 B3KSF4  
AL137462 CAB70750 Q9NQI0 EC 3.6.4.13

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens DDX4 NP_077726 M.musculus Ddx4 13206 Gene Info NP_001139357 90
R.norvegicus Ddx4 310090   NP_001071115 89
A.gambiae AgaP_AGAP008578 1275440   XP_314684 52
D.melanogaster vas 34884   NP_723899 48
C.elegans glh-1 172414   NP_491963 41
C.elegans glh-2 172361   NP_491876 40
C.elegans glh-3 172245   NP_491681 40
C.elegans glh-4 171941   NP_491207 37

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)