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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. NDST1, N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
Sequence ID:NM_001543
Entrez Gene ID:3340
Ensembl ID:ENSG00000070614

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, t-cell, testis, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:5q33.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 149887673 - 149933028

 Exon Info From UCSC:
NM_001543

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3882074Full LengthBC012888N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1
3834745IncompleteBC015828N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001534  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001543 NP_001534 P52848 EC 2.8.2.8 Sulfotransfer_1

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U17970 AAA67765 P52848 EC 2.8.2.8
U18918 AAA75281 P52848 EC 2.8.2.8
U36600 AAC27354 P52848 EC 2.8.2.8
BC012888 AAH12888 P52848 EC 2.8.2.8
AB209107 BAD92344 Q59GK2  
AK292448 BAF85137 A8K8T3  
AK293746 BAH11586 B7Z1Q0  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens NDST1 NP_001534 M.musculus Ndst1 15531 Gene Info NP_032332 98
R.norvegicus Ndst1 29633   NP_077337 98

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)