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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC19A3, solute carrier family 19, member 3
Sequence ID:NM_025243
RefSeqGene ID:NG_016359
Entrez Gene ID:80704
Ensembl ID:ENSG00000135917

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
THIAMINE METABOLISM DYSFUNCTION SYNDROME 2 (BIOTIN- ORTHIAMINE-RESPONSIVE ENCEPHALOPATHY TYPE 2) 

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q37Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 228551986 - 228582699

NM_025243 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
102372228549926228552288
23732514228552881228553022
25152707228560604228560796
27083536228563451228564279
35373688228566884228567035
36893775228582658228582744

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5177540Full LengthBC032014solute carrier family 19, member 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_079519  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_025243 NP_079519 Q9BZV2 Folate_carrier

Related Sequences

 
mRNAGenPeptSwissProt
AF271633 AAG53879 Q9BZV2
BC032014 AAH32014 Q9BZV2
AF283317 AAK69539 Q9BZV2
DQ892411 ABM83337  
DQ895625 ABM86551  
AK312464 BAG35371 B2R674
AK301490 BAH13497 B7Z761

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC19A3 NP_079519 D.melanogaster CG14694 41307   NP_650028 36
D.melanogaster CG6574 41308   NP_650029 36

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)