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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. LCA5, Leber congenital amaurosis 5
Sequence ID:NM_001122769
NM_181714
RefSeqGene ID:NG_016011
Entrez Gene ID:167691
Ensembl ID:ENSG00000135338

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:6q14.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:6: 80222488 - 80247118

 Exon Info From UCSC:
NM_001122769
NM_181714

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4823983Full LengthBC050327Leber congenital amaurosis 5

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001122769 NP_001116241    
NM_181714 NP_859065 Q86VQ0  

Related Sequences

 
mRNAGenPeptSwissProt
BC050327 AAH50327 Q86VQ0
JF432392 ADZ15609  
AK299314 BAG61324 B4DRL2

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LCA5 NP_001116241 M.musculus Lca5 75782 Gene Info NP_081724 71
R.norvegicus Lca5 300866   NP_001013976 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)