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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. LYPD6, LY6/PLAUR domain containing 6
Sequence ID:NM_001195685
NM_194317
Entrez Gene ID:130574
Ensembl ID:ENSG00000187123

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:2q23.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 150328190 - 150330137

Transcript StartTranscript EndChromosomal Start Chromosomal End
1124150187112150187235
125313150294151150294339
314412150305562150305660
413543150325158150325288
5443484150327196150330136

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5171270Full LengthBC047013LY6/PLAUR domain containing 6

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001195685 NP_001182614    
NM_194317 NP_919298 Q86Y78  

Related Sequences

 
mRNAGenPeptSwissProt
BC032836 AAH32836 Q86Y78
BC047013 AAH47013 Q86Y78
AY358623 AAQ88986 Q86Y78
AK124733 BAG54082 Q86Y78
AL831852 CAH56278 Q86Y78

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LYPD6 NP_919298 M.musculus Lypd6 320343 Gene Info NP_796113 95

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)