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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. PPBP, Pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)
Sequence ID:NM_002704
Entrez Gene ID:5473
Ensembl ID:ENSG00000163736

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:4q12-q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 74852988 - 74853907

NM_002704 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19367485215574853090
93710727485323374853368
107313077485367274853906

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5214257Full LengthBC028217pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_002695  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002704 NP_002695 P02775 IL8

Related Sequences

 
mRNAGenPeptSwissProt
M54995 AAA62836 P02775
BC028217 AAH28217 P02775
DQ891020 ABM81946  
DQ894200 ABM85126  
AK312166 BAG35100 P02775
CR456805 CAG33086 P02775

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPBP NP_002695 M.musculus Ppbp 57349 Gene Info NP_076274 55
R.norvegicus Ppbp 246358   NP_714943 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)