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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SNUPN, snurportin 1
Sequence ID:NM_001042581
NM_001042588
NM_005701
Entrez Gene ID:10073
Ensembl ID:ENSG00000169371

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, stem cell, stomach, synovium, testis, thymus, thyroid, uncharacterized tissue, uterus
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:15q24.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 75890427 - 75914767

 Exon Info From UCSC:
NM_001042581
NM_001042588
NM_005701

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3605328Full LengthBC004203snurportin 1

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001042581 NP_001036046    
NM_001042588 NP_001036053    
NM_005701 NP_005692 O95149  

Related Sequences

 
mRNAGenPeptSwissProt
AF039029 AAC70906 O95149
BC004203 AAH04203 O95149
DQ893088 ABM84014  
DQ896360 ABM87359  
AK289475 BAF82164 O95149
AK054641 BAG51404 B3KNP2
CR456811 CAG33092 O95149

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SNUPN NP_005692 M.musculus Snupn 66069 Gene Info NP_848461 93
R.norvegicus Snupn 316108   NP_001004270 93
C.elegans F23F1.5 173383   NP_493639 40
A.thaliana AT4G24880 828590   NP_567711 39

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)