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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GTPBP4, GTP binding protein 4
Sequence ID:NM_012341
Entrez Gene ID:23560
Ensembl ID:ENSG00000107937

Database Links

UniGeneEntrez GeneEnsembl GeneSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10p15-p14Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 1034396 - 1063629

 Exon Info From UCSC:
NM_012341

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5534986Full LengthBC038975GTP binding protein 4
4139481IncompleteBC021243GTP binding protein 4
4474374IncompleteBC033784GTP binding protein 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_036473  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_012341 NP_036473 Q9BZE4 NOG1
NOGCT

Related Sequences

 
mRNAGenPeptSwissProt
AF120334 AAD09830 Q9BZE4
BC033784 AAH33784 Q8N4P8
BC038975 AAH38975 Q9BZE4
AF325353 AAK13444 Q9BZE4
AK001552 BAA91752 Q9BZE4
AK222861 BAD96581 Q53GS0
AK001548 BAG50937 Q9BZE4
AK295231 BAG58224 B4DHR2
AK302219 BAG63575 B4DY13
AK301721 BAH13539 B7Z7A3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GTPBP4 NP_036473 M.musculus Gtpbp4 69237 Gene Info NP_081276 95
R.norvegicus Gtpbp4 114300   NP_446141 91
A.gambiae AgaP_AGAP007050 1270051   XP_308713 61
D.melanogaster CG8801 35963   NP_610484 61
C.elegans T07A9.9 176863   NP_741288 58
A.thaliana AT1G10300 837569   NP_172501 54
A.thaliana AT1G50920 841514   NP_175505 54
S.pombe nog1 2541126   NP_595499 54
N.crassa NCU05289 3878208   XP_962060 52
S.cerevisiae NOG1 856012   NP_015232 47

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)