Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SLC12A5, solute carrier family 12 (potassium/chloride transporter), member 5
Sequence ID:NM_001134771
NM_020708
Entrez Gene ID:57468
Ensembl ID:ENSG00000124140

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:20q13.12Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:20: 44658005 - 44686220

 Exon Info From UCSC:
NM_001134771
NM_020708

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
40146690Full LengthBC132668solute carrier family 12 (potassium-chloride transporter), member 5
40146692Full LengthBC132670solute carrier family 12 (potassium-chloride transporter), member 5
5197808IncompleteBC036329solute carrier family 12, (potassium-chloride transporter) member 5

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_065759  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001134771 NP_001128243 Q9H2X9  
NM_020708 NP_065759   AA_permease

Related Sequences

 
mRNAGenPeptSwissProt
AF208159 AAG43493 Q9H2X9
BC132668 AAI32669 Q9H2X9
BC132670 AAI32671 Q9H2X9
AB033002 BAA86490 Q9H2X9
AK289758 BAF82447 A8K143
AK294059 BAH11662 B7Z1X6
AK295096 BAH11972 B7Z2T6
AK295900 BAH12216 B7Z3I0
AK296331 BAH12319 B7Z3T3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SLC12A5 NP_065759 M.musculus Slc12a5 57138 Gene Info NP_065066 99
R.norvegicus Slc12a5 171373   NP_599190 99
A.thaliana CCC1 839924   NP_174333 40

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)