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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SUPT16H, suppressor of Ty 16 homolog (S. cerevisiae)
Sequence ID:NM_007192
RefSeqGene ID:NG_009932
Entrez Gene ID:11198
Ensembl ID:ENSG00000092201

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, stem cell, stomach, t-cell, testis, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q11.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 21819652 - 21826487

 Exon Info From UCSC:
NM_007192

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3163486IncompleteBC000565suppressor of Ty 16 homolog (S. cerevisiae)
3502875IncompleteBC014046suppressor of Ty 16 homolog (S. cerevisiae)
4524275IncompleteBC073849suppressor of Ty 16 homolog (S. cerevisiae)
4607658IncompleteBC111402suppressor of Ty 16 homolog (S. cerevisiae)
5582418IncompleteBC064561suppressor of Ty 16 homolog (S. cerevisiae)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009123  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007192 NP_009123 Q9Y5B9 Rtt106
SPT16

Related Sequences

 
mRNAGenPeptSwissProt
AF164924 AAF28231 Q9Y5B9
BC000565 AAH00565 Q9Y5B9
BC014046 AAH14046 Q9Y5B9
BC064561 AAH64561 Q9Y5B9
BC073849 AAH73849 Q9Y5B9
BC111402 AAI11403 Q0VGA3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SUPT16H NP_009123 M.musculus Supt16h 114741 Gene Info NP_291096 99
R.norvegicus Supt16h 305851   NP_001100731 99
A.gambiae AgaP_AGAP006817 1270248   XP_308929 62
D.melanogaster dre4 38248   NP_476610 61
C.elegans F55A3.3 172984   NP_492821 49
S.pombe spt16 2541355   NP_596526 40
N.crassa NCU01164 3877710   XP_961530 39
A.thaliana SPT16 826665   NP_192809 38
S.cerevisiae SPT16 852665   NP_011308 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta