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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. SFRP1, secreted frizzled-related protein 1
Sequence ID:NM_003012
Entrez Gene ID:6422
Ensembl ID:ENSG00000104332

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer Aberrations

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:8p11.21Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:8: 41121851 - 41166980

NM_003012 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1635484111947541123007
354936264116097941161056
362744824116613441166989

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5265277Full LengthBC036503secreted frizzled-related protein 1
3501872IncompleteBC004466secreted frizzled-related protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003003  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003012 NP_003003 Q8N474 Fz
NTR

Related Sequences

 
mRNAGenPeptSwissProt
AF001900 AAB61576 Q8N474
AF017987 AAB70793 Q8N474
AF056087 AAC12877 Q8N474
BC004466 AAH04466 Q05DS5
BC036503 AAH36503 Q8N474
AK127331 BAC86934 Q6ZSL4
AK293090 BAF85779 A8KAM5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SFRP1 NP_003003 M.musculus Sfrp1 20377 Gene Info NP_038862 95
R.norvegicus Sfrp1 84402   XP_224987 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)