Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. CHSY3, Chondroitin sulfate synthase 3
Sequence ID:NM_175856
Entrez Gene ID:337876
Ensembl ID:ENSG00000198108

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q23.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 129240522 - 129521621

NM_175856 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
1802129240522129241323
8031086129243769129244052
10873491129519921129522325

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9021322Full LengthBC137325chondroitin sulfate synthase 3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_787052  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_175856 NP_787052 Q70JA7 EC 2.4.1.226
EC 2.4.1.175
CHGN

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC137325 AAI37326 Q70JA7 EC 2.4.1.226
EC 2.4.1.175
AB086062 BAC98832 Q70JA7 EC 2.4.1.226
EC 2.4.1.175
AB175496 BAF47165 A2V663  
AJ504664 CAD43233 Q70JA7 EC 2.4.1.226
EC 2.4.1.175
AJ578034 CAE17326 Q70JA7 EC 2.4.1.226
EC 2.4.1.175
AJ632296 CAG17593 Q3MTV6  
AJ862728 CAH89316 Q1JTV1  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHSY3 NP_787052 R.norvegicus Chsy3 291577   XP_225912 91
M.musculus Chsy3 78923 Gene Info NP_001074797 91
C.elegans sqv-5 172851   NP_001021640 43

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)