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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CHST12, carbohydrate (chondroitin 4) sulfotransferase 12
Sequence ID:NM_001243794
NM_001243795
NM_018641
RefSeqGene ID:NG_029854
Entrez Gene ID:55501
Ensembl ID:ENSG00000136213

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7p22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 2443255 - 2474216

Transcript StartTranscript EndChromosomal Start Chromosomal End
15024432582443307
51206724721972474213

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3955396Full LengthBC002918carbohydrate (chondroitin 4) sulfotransferase 12
30511863Full LengthBC095492carbohydrate (chondroitin 4) sulfotransferase 12

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_061111  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_001243794 NP_001230723      
NM_001243795 NP_001230724      
NM_018641 NP_061111 Q9NRB3 EC 2.8.2.5 Sulfotransfer_2

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF239822 AAF81692 Q9NRB3 EC 2.8.2.5
BC002918 AAH02918 Q9NRB3 EC 2.8.2.5
BC095492 AAH95492 Q9NRB3 EC 2.8.2.5
AY358574 AAQ88937 Q9NRB3 EC 2.8.2.5
DQ892969 ABM83895    
DQ896217 ABM87216    
AK223191 BAD96911 Q53FU0  
AK223211 BAD96931 Q53FS1  
AK313484 BAG36268 Q9NRB3 EC 2.8.2.5
AJ289131 CAB92133 Q9NRB3 EC 2.8.2.5

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CHST12 NP_061111 M.musculus Chst12 59031 Gene Info NP_067503 85
R.norvegicus Chst12 304322   NP_001032864 84

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)