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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. BCMO1, beta-carotene 15,15'-monooxygenase 1
Sequence ID:NM_017429
RefSeqGene ID:NG_012171
Entrez Gene ID:53630
Ensembl ID:ENSG00000135697

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:16q23.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 81272295 - 81324747

 Exon Info From UCSC:
NM_017429

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8991926Full LengthBC126210beta-carotene 15,15'-monooxygenase 1
8991928Full LengthBC126212beta-carotene 15,15'-monooxygenase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_059125  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_017429 NP_059125 Q9HAY6 EC 1.14.99.36 RPE65

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF294900 AAG15380 Q9HAY6 EC 1.14.99.36
BC126210 AAI26211 Q9HAY6 EC 1.14.99.36
BC126212 AAI26213 Q9HAY6 EC 1.14.99.36
HQ258298 ADR83052    
AK001592 BAA91776 Q9HAY6 EC 1.14.99.36
AK296011 BAG58782 B4DJC0  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens BCMO1 NP_059125 M.musculus Bcmo1 63857 Gene Info NP_067461 86
R.norvegicus Bcmo1 114106   NP_446100 85
C.elegans bcmo-1 189959   NP_496729 36
C.elegans bcmo-2 173733   NP_494694 34

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)