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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PDIA6, protein disulfide isomerase family A, member 6
Sequence ID:NM_005742
Entrez Gene ID:10130
Ensembl ID:ENSG00000143870

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:2p25.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 10923518 - 10972611

 Exon Info From UCSC:
NM_005742

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
3454007Full LengthBC001312protein disulfide isomerase family A, member 6

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005733  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_005742 NP_005733 Q15084 EC 5.3.4.1 Thioredoxin

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
U79278 AAB50217 Q15084 EC 5.3.4.1
BC001312 AAH01312 Q15084 EC 5.3.4.1
DQ891186 ABM82112    
DQ894369 ABM85295    
D49489 BAA08450 Q15084 EC 5.3.4.1
AK127433 BAC86977 Q15084 EC 5.3.4.1
AK289428 BAF82117 Q15084 EC 5.3.4.1
AK131234 BAG54757 B3KY95  
AK294347 BAH11740 B7Z254  
AK297547 BAH12614 B7Z4M8  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PDIA6 NP_005733 M.musculus Pdia6 71853 Gene Info NP_082235 95
R.norvegicus Pdia6 286906   NP_001004442 95
D.melanogaster CaBP1 34976   NP_609792 62
A.gambiae AgaP_AGAP001919 1281205   XP_321144 61
C.elegans tag-320 180974   NP_509190 56
A.thaliana PDIL2-2 839355   NP_171990 46
A.thaliana PDIL2-3 817854   NP_180851 44

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)