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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. COG2, component of oligomeric golgi complex 2
Sequence ID:NM_001145036
NM_007357
Entrez Gene ID:22796
Ensembl ID:ENSG00000135775

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1q42.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 230778556 - 230829727

 Exon Info From UCSC:
NM_001145036
NM_007357

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4541036Full LengthBC051906component of oligomeric golgi complex 2
4876271Full LengthBC014960component of oligomeric golgi complex 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_031383  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001145036 NP_001138508    
NM_007357 NP_031383 Q14746 COG2

Related Sequences

 
mRNAGenPeptSwissProt
BC014960 AAH14960 Q14746
BC051906 AAH51906 Q14746
DQ892244 ABM83170  
DQ895445 ABM86371  
EU176335 ABW03786  
AK312678 BAG35559 B1ALW7
AK295251 BAH12018 B7Z2Y2
AK302288 BAH13668 B7Z7N2
AK302791 BAH13805 B7Z819
Z34975 CAA84427 Q14746

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COG2 NP_031383 M.musculus Cog2 76332 Gene Info NP_084022 86
R.norvegicus Cog2 690961   NP_001103964 86
D.melanogaster ldlCp 41870   NP_524366 36
A.gambiae AgaP_AGAP003824 1271564   XP_310386 35
A.thaliana AT4G24840 828587   NP_567710 32
C.elegans cogc-2 177473   NP_501092 28

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)