Skip Navigation
NCI banner National Cancer Institute U.S. National Institutes of Health National Cancer Institute
Genes
  • Gene Tools
Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. GPC2, Glypican 2
Sequence ID:NM_152742
Entrez Gene ID:221914
Ensembl ID:ENSG00000213420

Database Links

UniGeneEntrez GeneEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:7q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:7: 99767229 - 99774987

NM_152742 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
13610129976722999768105
101311889976888399769058
118913289976916199769300
132914759976940199769547
147616069976970999769839
160717699977145799771619
177018509977230799772387
185121739977319499773516
217423329977382999773987
233326669977465699774989

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5240315Full LengthBC027972glypican 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689955  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_152742 NP_689955 Q8N158 Glypican

Related Sequences

 
mRNAGenPeptSwissProt
BC027972 AAH27972 Q8N158
DQ893325 ABM84251  
DQ896641 ABM87640  
AK096281 BAC04745 Q8N158
AL834418 CAD39080 Q8N158
AM392909 CAL37787  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens GPC2 NP_689955 R.norvegicus Gpc2 171517   NP_612520 83
M.musculus Gpc2 71951 Gene Info NP_766000 83

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)