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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PPEF1, protein phosphatase, EF-hand calcium binding domain 1
Sequence ID:NM_006240
NM_152224
NM_152226
NM_152223
NM_152225
RefSeqGene ID:NG_012519
Entrez Gene ID:5475
Ensembl ID:ENSG00000086717

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:Xp22Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:X: 18725817 - 18846034

 Exon Info From UCSC:
NM_006240
NM_152224
NM_152226

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
5273322Full LengthBC036026protein phosphatase, EF-hand calcium binding domain 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_689410  NP_689412  NP_006231  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_006240 NP_006231 O14829 EC 3.1.3.16 efhand
Metallophos
IQ
PPP5
NM_152224 NP_689410     efhand
Metallophos
IQ
PPP5
NM_152226 NP_689412     efhand
Metallophos
IQ
PPP5

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
AF023455 AAB82795 O14829 EC 3.1.3.16
AF027977 AAC05825 O14829 EC 3.1.3.16
BC036026 AAH36026 O14829 EC 3.1.3.16
EU831890 ACE86649    
EU831813 ACE87331    
AK290463 BAF83152 O14829 EC 3.1.3.16
AK292235 BAF84924 A8K870  
AK315809 BAF98700 B0AZL8  
AK295504 BAH12089 B7Z353  
AK300815 BAH13353 B7Z6R7  
X97867 CAA66461 O14829 EC 3.1.3.16

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PPEF1 NP_006231 M.musculus Ppef1 237178 Gene Info NP_035277 71

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)