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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. PHF2, PHD finger protein 2
Sequence ID:NM_005392
Entrez Gene ID:5253
Ensembl ID:ENSG00000197724

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:9q22.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:9: 96425205 - 96440188

 Exon Info From UCSC:
NM_005392

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100069254Full LengthBC172560PHD finger protein 2
4943275IncompleteBC028051PHD finger protein 2
5268347IncompleteBC050112PHD finger protein 2
8862559IncompleteBC152437PHD finger protein 2
100068947BC172253PHD finger protein 2

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005383  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005392 NP_005383 O75151 PHD
JmjC

Related Sequences

 
mRNAGenPeptSwissProt
AF043725 AAD21791 O75151
BC028051 AAH28051 Q8N359
BC064613 AAH64613 Q6P2C5
BC172253 AAI72253  
BC172560 AAI72560  
AB014562 BAA31637 O75151
AK294861 BAG57965 B4DH04
AL834263 CAD38938 O75151

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens PHF2 NP_005383 M.musculus Phf2 18676 Gene Info NP_035208 94
R.norvegicus Phf2 306814   NP_001100812 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)