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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. THBS4, thrombospondin 4
Sequence ID:NM_003248
Entrez Gene ID:7060
Ensembl ID:ENSG00000113296

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:5q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:5: 79331845 - 79379105

 Exon Info From UCSC:
NM_003248

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6191808Full LengthBC050456thrombospondin 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003239  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_003248 NP_003239 P35443 EGF
TSP_3
TSP_C
EGF_CA

Related Sequences

 
mRNAGenPeptSwissProt
BC050456 AAH50456 P35443
AK313587 BAG36356 P35443
AK302842 BAH13818 B7Z832
Z19585 CAA79635 P35443

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens THBS4 NP_003239 M.musculus Thbs4 21828 Gene Info NP_035712 93
R.norvegicus Thbs4 29220   XP_342173 93

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)