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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. COCH, coagulation factor C homolog, cochlin (Limulus polyphemus)
Sequence ID:NM_001135058
NM_004086
RefSeqGene ID:NG_008211
Entrez Gene ID:1690
Ensembl ID:ENSG00000100473

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
DEAFNESS, AUTOSOMAL DOMINANT 9 

Cytogenetic Location (from UniGene)

Cytogenetic Location:14q11.2-q13Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:14: 31343764 - 31359822

 Exon Info From UCSC:
NM_001135058
NM_004086

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2824361Full LengthBC007230coagulation factor C homolog, cochlin (Limulus polyphemus)

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_004077  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001135058 NP_001128530    
NM_004086 NP_004077 O43405 VWA
LCCL

Related Sequences

 
mRNAGenPeptSwissProt
AF006740 AAC39545 O43405
BC007230 AAH07230 Q96IU6
AY358900 AAQ89259 O43405
AK130273 BAC85316 Q6ZP09
AK292724 BAF85413 O43405
AK123362 BAG53895 B3KVT3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COCH NP_001128530 M.musculus Coch 12810 Gene Info NP_031754 94

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)