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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. STMN1, stathmin 1
Sequence ID:NM_001145454
Entrez Gene ID:3925
Ensembl ID:ENSG00000117632

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p36.11Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 26227058 - 26232897

 Exon Info From UCSC:

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822803Full LengthBC082228stathmin 1/oncoprotein 18
3683516Full LengthBC014353stathmin 1/oncoprotein 18
40083863Full LengthBC114443stathmin 1/oncoprotein 18
40083868Full LengthBC114502stathmin 1/oncoprotein 18

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005554  NP_981944  NP_981946  

Protein Infomation

NM_001145454 NP_001138926    
NM_005563 NP_005554 P16949 Stathmin
NM_203399 NP_981944 P16949 Stathmin
NM_203401 NP_981946 P16949 Stathmin

Related Sequences

J04991 AAA59980 P16949
BC014353 AAH14353 Q96CE4
BC082228 AAH82228 P16949
BC114443 AAI14444  
BC114502 AAI14503  
D28428 BAA05794  
AK056768 BAB71277  
AB209282 BAD92519 Q59G27
AK311801 BAG34744 P16949
AB451319 BAG70133 B5BU83
AB451448 BAG70262 B5BU83
AK303692 BAH14020 P16949
X53305 CAA37391 P16949
Z11566 CAA77660 P16949
AM392854 CAL37732  

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens STMN1 NP_981946 M.musculus Stmn1 16765 Gene Info NP_062615 99
R.norvegicus Stmn1 29332   NP_058862 99

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta