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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. COG4, component of oligomeric golgi complex 4
Sequence ID:NM_001195139
NM_015386
RefSeqGene ID:NG_027529
Entrez Gene ID:25839
Ensembl ID:ENSG00000103051

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, peripheral nervous system, pineal gland, placenta, pooled tissue, prostate, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:16q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:16: 70514476 - 70557437


Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
6011802Full LengthBC072438component of oligomeric golgi complex 4
3451845IncompleteBC000796component of oligomeric golgi complex 4
3952952IncompleteBC013347component of oligomeric golgi complex 4
4106997IncompleteBC006306component of oligomeric golgi complex 4
4844771IncompleteBC027726component of oligomeric golgi complex 4
40112536IncompleteBC128144component of oligomeric golgi complex 4
40112540IncompleteBC128145component of oligomeric golgi complex 4

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056201  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001195139 NP_001182068    
NM_015386 NP_056201   COG4

Related Sequences

 
mRNAGenPeptSwissProt
BC000796 AAH00796 Q9H9E3
BC006306 AAH06306 Q9H9E3
BC013347 AAH13347 Q9H9E3
BC027726 AAH27726 Q6PIW8
BC072438 AAH72438 Q9H9E3
BC128144 AAI28145 A2VCL3
BC128145 AAI28146 A2VCL3
AK022874 BAB14286 Q9H9E3
AK026435 BAB15483 Q9H9E3
AK096557 BAC04816 Q8N8L9
AB088369 BAC05682 Q9H9E3
AK293235 BAG56773 B4DDL2
AK297557 BAG59950 Q9H9E3
AL050101 CAB43272 Q9H9E3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens COG4 NP_056201 R.norvegicus Cog4 361407   NP_001101919 95
M.musculus Cog4 102339 Gene Info NP_598734 94
A.gambiae AgaP_AGAP008875 1279844   XP_552742 41
D.melanogaster CG7456 34442   NP_609413 41
A.thaliana AT4G01400 827943   NP_001154198 35
C.elegans cogc-4 173518   NP_493966 34
N.crassa NCU11246 5847672   XP_001728368 26
S.cerevisiae COG4 856220   NP_015430 23
S.pombe cog4 2539017   NP_588155 23

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)