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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. CTBP1, C-terminal binding protein 1
Sequence ID:NM_001012614
NM_001328
Entrez Gene ID:1487
Ensembl ID:ENSG00000159692

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:4p16Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:4: 1205287 - 1242774

 Exon Info From UCSC:
NM_001012614
NM_001328

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4128336Full LengthBC011655C-terminal binding protein 1
6461670Full LengthBC053320C-terminal binding protein 1
30344174Full LengthBC098400C-terminal binding protein 1
5806192IncompleteBC064333C-terminal binding protein 1
6338360IncompleteBC072021C-terminal binding protein 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_001319  NP_001012632  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001012614 NP_001012632   2-Hacid_dh
2-Hacid_dh_C
NM_001328 NP_001319 Q13363 2-Hacid_dh
2-Hacid_dh_C

Related Sequences

 
mRNAGenPeptSwissProt
U37408 AAC62822 Q13363
AF091555 AAD14597 Q13363
BC011655 AAH11655 Q13363
BC053320 AAH53320 Q13363
BC072021 AAH72021 Q6IP95
BC098400 AAH98400 Q4KMQ8
DQ891918 ABM82844  
DQ895102 ABM86028  
AL137653 CAB70861 Q9NSY3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens CTBP1 NP_001319 M.musculus Ctbp1 13016 Gene Info NP_038530 99
R.norvegicus Ctbp1 29382   NP_062074 99
C.elegans ctbp-1 180853   NP_508983 53

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta