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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. LMO7, LIM domain 7
Sequence ID:NM_005358
NM_015842
Entrez Gene ID:4008
Ensembl ID:ENSG00000136153

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:13q22.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:13: 76334866 - 76432811

 Exon Info From UCSC:
NM_005358
NM_015842

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100015408BC148408LIM domain 7

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_005349  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_005358 NP_005349   CH
LIM
PDZ
NM_015842 NP_056667    

Related Sequences

 
mRNAGenPeptSwissProt
U90654 AAB86592 Q8WWI1
AF144237 AAD33924 Q8WWI1
AF174600 AAF04521 Q8WWI1
BC148408 AAI48409  
AF330045 AAL37480 Q8WWI1
FJ711162 ACV60543 F8J2B5
AB020665 BAA74881 Q8WWI1
AK304051 BAH14099 B7Z8W3

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens LMO7 NP_056667 M.musculus Lmo7 380928 Gene Info NP_963287 80
R.norvegicus Lmo7 361084   NP_001001515 74

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)