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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. ST6GAL1, ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
Sequence ID:NM_003032
NM_173216
NM_173217
Entrez Gene ID:6480
Ensembl ID:ENSG00000073849

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q27-q28Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 186794217 - 186796341

 Exon Info From UCSC:
NM_003032
NM_173216
NM_173217

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4339124Full LengthBC031476ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
5557868Full LengthBC040009ST6 beta-galactosamide alpha-2,6-sialyltranferase 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003023  NP_775323  

Protein Infomation

RefSeq
mRNAProteinSwissProtEnzymePfam
NM_003032 NP_003023 P15907 EC 2.4.99.1 Glyco_transf_29
NM_173216 NP_775323 P15907 EC 2.4.99.1 Glyco_transf_29
NM_173217 NP_775324      

Related Sequences

 
mRNAGenPeptSwissProtEnzyme
BC031476 AAH31476 P15907 EC 2.4.99.1
BC040009 AAH40009 P15907 EC 2.4.99.1
HQ447485 ADQ31971    
AK292879 BAF85568 P15907 EC 2.4.99.1
AK312023 BAG34960 B2R513  
A17362 CAA01327 P15907 EC 2.4.99.1
A23699 CAA01686 P15907 EC 2.4.99.1
X17247 CAA35111 P15907 EC 2.4.99.1
X54363 CAA38246 P15907 EC 2.4.99.1
X62822 CAA44634 P15907 EC 2.4.99.1

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens ST6GAL1 NP_003023 R.norvegicus St6gal1 25197   NP_001106815 81
M.musculus St6gal1 20440 Gene Info NP_666045 80

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)