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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. SYNM, synemin, intermediate filament protein
Sequence ID:NM_015286
NM_145728
RefSeqGene ID:NG_008210
Entrez Gene ID:23336
Ensembl ID:ENSG00000182253

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data


Cytogenetic Location (from UniGene)

Cytogenetic Location:15q26.3Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:15: 99645247 - 99675788

 Exon Info From UCSC:
NM_015286
NM_145728

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
8860516Full LengthBC151243synemin, intermediate filament protein
40027592IncompleteBC110066synemin, intermediate filament protein

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_056101  NP_663780  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_015286 NP_056101   Filament
NM_145728 NP_663780   Filament

Related Sequences

 
mRNAGenPeptSwissProt
BC110066 AAI10067 O15061
BC151243 AAI51244 O15061
AF359284 AAK57487 O15061
AB002351 BAA20810 O15061
AJ310521 CAC83858 O15061
AJ310522 CAC83859 O15061
AJ697971 CAG27071 O15061

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens SYNM NP_663780 M.musculus Synm 233335 Gene Info NP_964001 70
R.norvegicus Synm 308709   NP_001128330 69

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)