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Cancer Genome Characterization Initiative

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Gene Info

Gene Information For:Hs. MRPL3, mitochondrial ribosomal protein L3
Sequence ID:NM_007208
RefSeqGene ID:NG_029207
Entrez Gene ID:11222
Ensembl ID:ENSG00000114686

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, pineal gland, pituitary gland, placenta, pooled tissue, prostate, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:3q21-q23Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:3: 131181399 - 131221827

NM_007208 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
19692131181045131181718
693770131186934131187011
771848131188539131188616
849957131190014131190122
9581018131206523131206583
10191118131208824131208923
11191217131217022131217120
12181309131219273131219364
13101494131220374131220558
14951750131221573131221828

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2901120Full LengthBC003375mitochondrial ribosomal protein L3

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_009139  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_007208 NP_009139 P09001 Ribosomal_L3

Related Sequences

 
mRNAGenPeptSwissProt
BC003375 AAH03375 P09001
HQ448253 ADQ32733  
AK296626 BAG59232 B4DKM0
AK301377 BAG62918 B4DW56
X06323 CAA29639 P09001
CR456720 CAG33001 P09001

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens MRPL3 NP_009139 R.norvegicus Mrpl3 300974   NP_001100322 83
M.musculus Mrpl3 94062 Gene Info NP_444389 82
C.elegans C26E6.6 175666   NP_498045 44
A.thaliana RPL3P 821011   NP_566579 42
D.melanogaster mRpL3 32523   NP_511166 42
S.cerevisiae MRPL9 853135   NP_011736 42
A.gambiae AgaP_AGAP000857 1277370   XP_316827 41
S.pombe mrpl9 2543386   NP_593885 40
N.crassa NCU06749 3879682   XP_963521 38

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)