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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. WDR77, WD repeat domain 77
Sequence ID:NM_024102
Entrez Gene ID:79084
Ensembl ID:ENSG00000116455

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, placenta, pooled tissue, prostate, retina, salivary gland, skin, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:1p13.2Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:1: 111982895 - 111991878

NM_024102 exon info from UCSC:

Transcript StartTranscript EndChromosomal Start Chromosomal End
221520111982512111984010
15211589111984646111984714
15901698111985274111985382
16991770111985944111986015
17711825111986488111986542
18261896111986675111986745
18971946111989716111989765
19472088111990056111990197
20892274111991240111991425
22752428111991676111991829

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
2822173Full LengthBC001679WD repeat domain 77
2822173Full LengthBC006477WD repeat domain 77
3614223Full LengthBC009411WD repeat domain 77
3845908Full LengthBC016946WD repeat domain 77
3941878Full LengthBC011778WD repeat domain 77

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_077007  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_024102 NP_077007 Q9BQA1 WD40

Related Sequences

 
mRNAGenPeptSwissProt
BC001679 AAH01679 Q9BQA1
BC006477 AAH06477 Q9BQA1
BC009411 AAH09411 Q9BQA1
BC011778 AAH11778 Q9BQA1
BC016946 AAH16946 Q9BQA1
AF478464 AAL79917 Q9BQA1
AY225316 AAP79114 Q9BQA1
HQ448191 ADQ32672  
AB073603 BAD38641 Q9BQA1
AK223189 BAD96909 Q9BQA1
AB074171 BAE45736 Q9BQA1
AK022860 BAG51128 Q9BQA1
AK296163 BAG58902 B4DJP0
AK298179 BAG60450 B4DP38

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens WDR77 NP_077007 M.musculus Wdr77 70465 Gene Info NP_081708 90
R.norvegicus Wdr77 310769   NP_001008771 90
A.gambiae AgaP_AGAP009782 1279195   XP_318877 28
D.melanogaster vls 35289   NP_610019 25

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)