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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. TNFRSF11A, tumor necrosis factor receptor superfamily, member 11a, NFKB activator
Sequence ID:NM_001270949
NM_001270950
NM_001270951
NM_003839
RefSeqGene ID:NG_008098
Entrez Gene ID:8792
Ensembl ID:ENSG00000141655

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data


Associated Diseases (from OMIM)

DiseaseOther Genes
OSTEOLYSIS, FAMILIAL EXPANSILE 
OSTEOPETROSIS, AUTOSOMAL RECESSIVE 7 
OSTEOSARCOMACHEK2
CHEK2
RB1
TP53
TP53
PAGET DISEASE OF BONESQSTM1

Cytogenetic Location (from UniGene)

Cytogenetic Location:18q22.1Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:18: 59992519 - 60054892

Transcript StartTranscript EndChromosomal Start Chromosomal End
11135999254759992659
1141956001540060015481
1963216001704460017169
3224656002162360021766
4665596002548060025573
5606546002718760027281
6557686002891260029025
7698216003394060033992
82216056003593360036716
160631246005198360053501

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
100016154BC152906tumor necrosis factor receptor superfamily, member 11a, NFKB activator

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_003830  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_001270949 NP_001257878    
NM_001270950 NP_001257879    
NM_001270951 NP_001257880    
NM_003839 NP_003830 Q9Y6Q6 TNFR_c6

Related Sequences

 
mRNAGenPeptSwissProt
AF018253 AAB86809 Q9Y6Q6
BC152906 AAI52907  
AB209762 BAD92999 Q59EP9
HE647782 CCF23032 I4EC36
HE649916 CCF55033 I4EC38
HE649917 CCF55034 I4EC39
HE659518 CCF77738 I7JE63

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens TNFRSF11A NP_003830 M.musculus Tnfrsf11a 21934 Gene Info NP_033425 70
R.norvegicus Tnfrsf11a 498206   XP_573424 70

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)

BioCarta Pathways
Pathway information courtesy of BioCarta