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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.


Gene Info

Gene Information For:Hs. FN1, fibronectin 1
Sequence ID:NM_002026
NM_054034
NM_212474
NM_212476
NM_212478
NM_212482
NM_212475
RefSeqGene ID:NG_012196
Entrez Gene ID:2335
Ensembl ID:ENSG00000115414

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    adrenal cortex, b-cell, bone, bone marrow, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymph node, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, peripheral nervous system, pituitary gland, placenta, pooled tissue, prostate, retina, salivary gland, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Associated Diseases (from OMIM)

DiseaseOther Genes
GLOMERULOPATHY WITH FIBRONECTIN DEPOSITS 2 

Cytogenetic Location (from UniGene)

Cytogenetic Location:2q34Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:2: 216225588 - 216300791

 Exon Info From UCSC:
NM_002026
NM_054034
NM_212474
NM_212476
NM_212478
NM_212482
NM_212475

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
9052268Full LengthBC143754fibronectin 1
9052277Full LengthBC143763fibronectin 1
40125727Full LengthBC117176fibronectin 1
3506187IncompleteBC005858fibronectin 1
3886582IncompleteBC016875fibronectin 1

Protein Similarities Based on Shared Motif Content

Find gene products sharing protein motifs with:  NP_473375  

Protein Infomation

RefSeq
mRNAProteinSwissProtPfam
NM_002026 NP_002017    
NM_054034 NP_473375   fn1
fn2
NM_212474 NP_997639    
NM_212476 NP_997641    
NM_212478 NP_997643    
NM_212482 NP_997647    

Related Sequences

 
mRNAGenPeptSwissProt
M10905 AAA52462 P02751
M14059 AAA52463 P02751
M14060 AAA52464 Q14327
M27589 AAA52465 P02751
M27590 AAA52466 Q14328
U41724 AAD00013 O95608
U41850 AAD00014 P02751
U42404 AAD00015 P02751
U42592 AAD00017 P02751
U42593 AAD00018 P02751
U42594 AAD00019 P02751
U42457 AAD04751 P02751
U42455 AAD09448 P02751
U42456 AAD09449 P02751
U42458 AAD09450 P02751
U60068 AAD10853 Q9UQS6
U60067 AAD11500 O95617
AF312399 AAG30571 P02751
AF130095 AAG35520 Q9H382
BC005858 AAH05858 Q7L553
BC016875 AAH16875 Q6PJE5
BC117176 AAI17177 P02751
BC143754 AAI43755 B7ZLE5
BC143763 AAI43764 B7ZLF0
BT006856 AAP35502 Q9H382
AY450391 AAR21084 Q6STG2
EF550130 ABR68534 A6YID2
EF550131 ABR68535 A6YID3
EF550132 ABR68536 A6YID4
EF550133 ABR68537 A6YID5
EF550134 ABR68538 A6YID6
EF550135 ABR68539 A6YID7
EU832031 ACE86693  
EU831936 ACE87377  
AB191261 BAD52437 P02751
AB209287 BAD92524 Q59G22
AB209840 BAD93077 P02751
AK297733 BAG60083 B4DN21
AK300216 BAG61984 B4DTH2
AK300246 BAG62013 B4DTK1
AK300458 BAG62178 B4DU16
AK316350 BAH14721 B4DN21
X02761 CAA26536 P02751
AJ276395 CAC20427 P02751
AJ320525 CAC86914 P02751
AJ320526 CAC86915 P02751
AJ320527 CAC86916 P02751
AJ535086 CAD59389 P02751
Q564H7
AL832202 CAD91166 P02751
BX537590 CAD97791 P02751
BX538017 CAD97964 P02751
BX538018 CAD97965 P02751
BX538045 CAD97984 Q7Z391
BX640608 CAE45714 P02751
BX640638 CAE45786 Q6N084
BX640731 CAE45847 P02751
BX640802 CAE45885 Q6MZF4
BX640875 CAE45932 P02751
BX640920 CAE45958 P02751
BX640999 CAE46002 Q6MZM7
BX649182 CAE46200 Q6MZF4
CR749281 CAH18136 P02751
CR749316 CAH18171 P02751
CR749317 CAH18172 P02751
CR749666 CAH18457 Q68CX6
AJ849445 CAH60958 Q564H7
CR936623 CAI56766 Q5CZ99

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene
Gene Info Protein
H.sapiens FN1 NP_997647 R.norvegicus Fn1 25661   NP_062016 93
M.musculus Fn1 14268 Gene Info NP_034363 92

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)