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Cancer Genome Characterization Initiative

Visit the database of genomic characterization data for multiple tumor types.

Gene Info

Gene Information For:Hs. IFIT1, interferon-induced protein with tetratricopeptide repeats 1
Sequence ID:NM_001270927
Entrez Gene ID:3434
Ensembl ID:ENSG00000185745

Database Links

UniGeneEntrez GeneOMIMEnsembl GeneHPRDVegaDTPSNPSNP: GeneViewSNP: VarViewAssembliesCancer AberrationsRNAi

Gene Expression Data

  • This gene is found in these cDNA libraries from the following tissue types:
    bone, brain, cartilage, cerebellum, cerebrum, cervix, colon, ear, embryonic tissue, endocrine, esophagus, eye, fetus, gastrointestinal tract, heart, kidney, liver, lung, lymphoreticular, mammary gland, muscle, nervous, ovary, pancreas, pancreatic islet, parathyroid, peripheral nervous system, pineal gland, pituitary gland, placenta, pooled tissue, prostate, retina, skin, soft tissue, spleen, stem cell, stomach, synovium, t-cell, testis, thymus, thyroid, uncharacterized tissue, uterus, vascular
  • SAGE Anatomic Viewer
  • SAGE Digital Northern

  • Monochromatic SAGE/cDNA Virtual Northern

  • Two-dimensional array displays (similar expression pattern in NCI60 microarray data or SAGE data)

Cytogenetic Location (from UniGene)

Cytogenetic Location:10q23.31Mitelman Breakpoint Data

Chromosomal Position (from UCSC)

Chromosomal Position:10: 91152398 - 91163739

Transcript StartTranscript EndChromosomal Start Chromosomal End

Full-Length MGC Clones for This Gene

IMAGE IdStatusAccession GenBank Def Line
4250452Full LengthBC007091interferon-induced protein with tetratricopeptide repeats 1

Protein Infomation

NM_001270927 NP_001257856    
NM_001270928 NP_001257857    
NM_001270929 NP_001257858    
NM_001270930 NP_001257859    
NM_001548 NP_001539 P09914  

Related Sequences

BC007091 AAH07091 P09914
BT006667 AAP35313 P09914
DQ893534 ABM84460  
DQ893755 ABM84681  
AK314588 BAG37163 P09914
AK092813 BAG52612 B3KS50
X03557 CAA27244 P09914

Homologs (from HomoloGene)
Note: Both orthologs and paralogs are included.
Organism Symbol Protein Homolog Similarity
(% aa unchanged)
Organism Symbol Entrez
Gene Info Protein
H.sapiens IFIT1 NP_001539 M.musculus Gm14446 667373 Gene Info NP_001095075 59
R.norvegicus Ifit1lb 294090   XP_220058 59
M.musculus 2010002M12Rik 112419 Gene Info NP_444447 55

Gene Ontology
Gene classification by the European Bioinformatics Institute, as recorded in GOA (GO Annotation@EBI)